medkit.tools.mtsamples#

This module aims to provide facilities for accessing some examples of mtsamples files available on this repository: https://github.com/neurazlab/mtsamplesFR

Refer to the repository for more information.

This repository contains:

a version of mtsamples.csv
Source: https://www.kaggle.com/datasets/tboyle10/medicaltranscriptions license: CC0: Public Domain
a mtsamples_translation.json file which is a translation to french

Date: 08/04/2022

Functions:

`convert_mtsamples_to_medkit`(output_file[, ...])	Convert mtsamples data into a medkit file
`load_mtsamples`([cache_dir, translated, nb_max])	Function loading mtsamples data into medkit text documents

load_mtsamples(cache_dir='.cache', translated=True, nb_max=None)[source]#

Function loading mtsamples data into medkit text documents

Parameters

cache_dir (Union[Path, str]) – Directory where to store mtsamples file. Default: .cache
translated (bool) – If True (default), mtsamples_translated.json file is used (FR). If False, mtsamples.csv is used (EN)
nb_max (Optional[int]) – Maximum number of documents to load

Return type

List[TextDocument]

Returns

List[TextDocument] – The medkit text documents corresponding to mtsamples data

convert_mtsamples_to_medkit(output_file, encoding='utf-8', cache_dir='.cache', translated=True)[source]#

Convert mtsamples data into a medkit file

Parameters

output_file (Union[Path, str]) – Path to the medkit jsonl file to generate
encoding (Optional[str]) – Encoding of the medkit file to generate
cache_dir (Union[Path, str]) – Directory where mtsamples file is cached. Default: .cache
translated (bool) – If True (default), mtsamples_translated.json file is used (FR). If False, mtsamples.csv is used (EN)